Difference: FJPPLApplications (4 vs. 5)

Revision 52016-08-01 - Main.SebastienIncerti

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META TOPICPARENT name="FJPPLprojects"
APP_01 : The Geant4-DNA project at the Physics-Biology frontier

Summary :

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<		The Bio2 projects encompasses modeling and experimental interdisciplinary activities. Both Japan and French teams are involved in the Geant4-DNA project aiming at extending the Geant4 Monte Carlo toolkit for the modeling of early biological effects of ionising radiation at the DNA scale. In 2014, the physics models of Geant4-DNA have all been deployed to GPGPU allowing to reach impressive performance (> 200 speed gain). Two papers have been submitted for publication. In 2015, the porting of new physics models for the simulation of electrons in liquid water is on-going. In the near future, we expect to start the porting of Geant4-DNA physicochemical and chemical processes to GPGPU.
>
>		The Bio2 projects encompasses modeling and experimental interdisciplinary activities. Both Japan and French teams are involved in the Geant4-DNA project aiming at extending the Geant4 Monte Carlo toolkit for the modeling of early biological effects of ionising radiation at the DNA scale. In 2014, the physics models of Geant4-DNA have all been deployed to GPGPU allowing to reach impressive performance (> 200 speed gain). This porting allowed in particular a deep testing of Geant4-DNA physics models. In 2015 and 2016, the porting of new Geant4-DNA physics models as well as physico-chemistry and chemistry processes has been achieved for the first time reaching again impressive computing performance; this will significantly boost the development of Geant4-DNA based applications at the physics-biology frontier.
  French members :
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<		S. Incerti
>
>		S. Incerti, D. Sakata
  Japanese members :
T. Sasaki, K. Amako, Y. Hirano, A. Kimura, K. Murakami, S. Okado, C. Omachi, T. Toshito

References :

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<		[1] THE GEANT4-DNA PROJECT, S. Incerti et al., Int. J. Model. Simul. Sci. Comput. 1 (2010) 157
[2] ACCELERATION OF GEANT4-DNA PHYSICS MODELS
PERFORMANCE USING GRAPHICS PROCESSING UNIT, S. Okada et al., Joint International Conference on Supercomputing in Nuclear Applications + Monte Carlo (SNA+MC2015), Nashville, TN, USA, April 19-23, 2015, submitted
[3] GPU ACCELERATION OF MONTE CARLO SIMULATION AT THE CELLULAR AND DNA LEVELS, S. Okada et al., InMed2015 (Innovation in Medicine and Healthcare 2015), Kyoto, Japan,September 11-12, 2015, submitted
>
>		[1] The Geant4-DNA project, S. Incerti, G. Baldacchino, M. Bernal, R. Capra, C. Champion, Z. Francis, S. Guatelli, P. Gučye, A. Mantero, B. Mascialino, P. Moretto, P. Nieminen, A. Rosenfeld, C. Villagrasa and C. Zacharatou, Int. J. Model. Simul. Sci. Comput. 1 (2010) 157–178

[2] Geant4 Monte Carlo simulation of absorbed dose and radiolysis yields enhancement from a gold nanoparticle under MeV proton irradiation, H. N. Tran, M. Karamitros, V. Ivantchenko, S. Guatelli, S. McKinnon, K. Murakami, T. Sasaki, S. Okada, M.C. Bordage, Z. Francis, Z. EL Bitar, M. A. Bernal, J. I. Shin, S. B. Lee, Ph. Barberet, T.T. Tran, J. M. C. Brown, S. Incerti, Nucl. Instrum. Meth. B 373 (2016) 126-139

[3] GPU Acceleration of Monte Carlo Simulation at the Cellular and DNA Levels, S. Okada, K. Murakami, K. Amako, T. Sasaki, S. Incerti, M. Karamitros, N. Henderson, M. Gerritsen, M. Asai, A. Dotti, Smart Innovation, Systems and Technologies 45 (2016) 323-332

[4] Track structure modeling in liquid water: A review of the Geant4-DNA very low energy extension of the Geant4 Monte Carlo simulation toolkit, M. A. Bernal, M. C. Bordage, J. M. C. Brown, M. Davídková, E. Delage, Z. El Bitar, S. A. Enger, Z. Francis, S. Guatelli, V. N. Ivanchenko, M. Karamitros, I. Kyriakou, L. Maigne, S. Meylan, K. Murakami, S. Okada, H. Payno, Y. Perrot, I. Petrovic, Q.T. Pham, A. Ristic-Fira, T. Sasaki, V. Štěpán, H. N. Tran, C. Villagrasa, S. Incerti, Phys. Med. 31 (2015) 861-874

  Website :
http://geant4-dna.org
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