APP_01 : The Geant4-DNA project at the Physics-Biology frontier

Summary : The Bio2 projects encompasses modeling and experimental interdisciplinary activities. Both Japan and French teams are involved in the Geant4-DNA project aiming at extending the Geant4 Monte Carlo toolkit for the modeling of early biological effects of ionising radiation at the DNA scale. In 2014, the physics models of Geant4-DNA have all been deployed to GPGPU allowing to reach impressive performance (> 200 speed gain). Two papers have been submitted for publication. In 2015, the porting of new physics models for the simulation of electrons in liquid water is on-going. In the near future, we expect to start the porting of Geant4-DNA physicochemical and chemical processes to GPGPU.

French members :
S. Incerti,

Japanese members :
T. Sasaki, K. Amako, Y. Hirano, A. Kimura, K. Murakami, S. Okado, C. Omachi, T. Toshito

References :

- THE GEANT4-DNA PROJECT, S. Incerti et al., Int. J. Model. Simul. Sci. Comput. 1 (2010) 157

- ACCELERATION OF GEANT4-DNA PHYSICS MODELS
PERFORMANCE USING GRAPHICS PROCESSING UNIT, S. Okada et al., Joint International Conference on Supercomputing in Nuclear Applications + Monte Carlo (SNA+MC2015), Nashville, TN, USA, April 19-23, 2015, submitted

- GPU ACCELERATION OF MONTE CARLO SIMULATION AT THE CELLULAR AND DNA LEVELS, S. Okada et al., InMed2015 (Innovation in Medicine and Healthcare 2015), Kyoto, Japan,September 11-12, 2015, submitted

website :
http://geant4-dna.org

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APP_02 : Study of biomolecular ion stability in gas-phase by two complementary approaches : a cryogenic storage ring and a device for molecular cluster irradiation

Summary :

French members :
M. Farizon, H. Abdoul-Carime, B. Farizon, L. Feketeova

Japanese members :
T. Azuma, T. Furukawa, S. Kuma, J. Matsumoto, Y. Nakano, H. Shiromaru, H. Tanuma

References :

website :

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Topic revision: r2 - 2015-07-13 - 16:14:13 - SebastienIncerti
 
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